Survomatic
About Survomatic
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Version: 1.7.0.0
Result: ERROR Check time: 2018-01-26 22:25 * using log directory '' * using R Under development (unstable) (2018-01-26 r74168) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: ISO8859-1 * using option '--as-cran' * checking for file 'Survomatic/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'Survomatic' version '1.7.0.0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialized R objects in the sources ... OK * checking whether package 'Survomatic' can be installed ... WARNING Found the following significant warnings: Warning: replacing previous import 'survival::untangle.specials' by 'quantreg::untangle.specials' when loading 'Survomatic' See '00install.out' for details. * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Title field: should not end in a period. * checking top-level files ... NOTE Non-standard file/directory found at top level: 'PLAN' * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... WARNING print: function(x, ...) print.survomatic: function(xx) summary: function(object, ...) summary.survomatic: function(xx) plot: function(x, ...) plot.survomatic: function(xx, what, col, lwd, lty, xlim) See section 'Generic functions and methods' in the 'Writing R Extensions' manual. Found the following apparent S3 methods exported but not registered: plot.summary.crqs plot.survomatic print.survomatic summary.survomatic See section 'Registering S3 methods' in the 'Writing R Extensions' manual. * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... WARNING Found a .Internal call in the following function: 'opsurv' with calls to .Internal functions 'optim' Packages should not call .Internal(): it is not part of the API, for use only by R itself and subject to change without notice. In addition to the above warning(s), found the following notes: NB: .First.lib is obsolete and will not be used in R >= 3.0.0 File 'Survomatic/R/firstlib.R': .First.lib calls: cat(paste(packageDescription("Survomatic")[c("Package", "Version")], collapse = " ")) cat(" loaded\n") Package startup functions should use 'packageStartupMessage' to generate messages. See section 'Good practice' in '?.onAttach'. sigmods: warning in grep(paste("^", x$model, "$", sep = "", collapse = "|"), colnames(cmat), val = T): partial argument match of 'val' to 'value' .First.lib: no visible global function definition for 'packageDescription' .First.lib: no visible global function definition for 'data' .First.lib: no visible binding for global variable 'ctrl' .First.lib: no visible binding for global variable 'dex' .First.lib: no visible binding for global variable 'modelpars' .First.lib: no visible binding for global variable 'dmodels' cpars: no visible global function definition for 'pchisq' empnull : 't.test' ezz: no visible global function definition for 'quantile' fixpar: no visible binding for global variable 'rm.temp' grf: no visible binding for global variable 'rm.temp' grf2: no visible binding for global variable 'rm.temp' loadlr: no visible global function definition for 'read.table' mh: no visible global function definition for 'rbinom' modelinfo: no visible binding for global variable 'simple' modpars : 'na.omit' modpars: no visible global function definition for 'na.omit' opsurv: no visible binding for '<<-' assignment to 'rm.temp' opsurv: no visible binding for global variable 'rm.temp' opsurv: no visible global function definition for 'optimHess' plot.summary.crqs: no visible binding for global variable 'coefficients' plot.summary.crqs: no visible global function definition for 'par' plot.summary.crqs: no visible global function definition for 'plot' plot.summary.crqs: no visible global function definition for 'title' plot.summary.crqs: no visible global function definition for 'polygon' plot.summary.crqs: no visible global function definition for 'points' plot.summary.crqs: no visible global function definition for 'lines' plot.summary.crqs: no visible global function definition for 'abline' plotsurv: no visible binding for global variable 'lines' plotsurv: no visible binding for global variable 'plot' plotsurv.old: no visible global function definition for 'plot' plotsurv.old: no visible global function definition for 'points' qci: no visible global function definition for 'quantile' sampler: no visible global function definition for 'txtProgressBar' sampler: no visible global function definition for 'rnorm' sampler: no visible global function definition for 'setTxtProgressBar' sigmods: no visible global function definition for 'pchisq' simsurv: no visible global function definition for 'rweibull' simsurv: no visible global function definition for 'rexp' smean: no visible global function definition for 'qnorm' smoother: no visible binding for global variable 'smooth' smoother: no visible global function definition for 'embed' survexp: no visible global function definition for 'integrate' survsumm: no visible global function definition for 'capture.output' survsumm: no visible global function definition for 'p.adjust' t4253h: no visible global function definition for 'embed' t4253h: no visible binding for global variable 'median' t4253h: no visible global function definition for 'median' Undefined global functions or variables: abline capture.output coefficients ctrl data dex dmodels embed integrate lines median modelpars na.omit optimHess p.adjust packageDescription par pchisq plot points polygon qnorm quantile rbinom read.table rexp rm.temp rnorm rweibull setTxtProgressBar simple smooth t.test title txtProgressBar Consider adding importFrom("graphics", "abline", "lines", "par", "plot", "points", "polygon", "title") importFrom("stats", "coefficients", "embed", "integrate", "median", "na.omit", "optimHess", "p.adjust", "pchisq", "qnorm", "quantile", "rbinom", "rexp", "rnorm", "rweibull", "smooth", "t.test") importFrom("utils", "capture.output", "data", "packageDescription", "read.table", "setTxtProgressBar", "txtProgressBar") to your NAMESPACE file. Found the following assignments to the global environment: File 'Survomatic/R/loadlr.R': assign(i, read.table(i, header = header, sep = sep), envir = .GlobalEnv) assign(paste(label, fpsuffix, sep = ""), get(input[1]), envir = .GlobalEnv) * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... NOTE Rd file 'ezz.Rd': \usage lines wider than 90 characters: ezz(d, d2 = NULL, g, quant = 0.9, step = 0.01, thresh = 0.05, gnames = NULL, noob = F, thetas = c(0.05, 0.95), debug = F) Rd file 'modelshow.Rd': \usage lines wider than 90 characters: modelshow(label, x = NULL, reload = F, k = 2, datacol = "LR", modelcol = "model", nullmodelcol = "null_model", chicol = "p (chi squared ... [TRUNCATED] Rd file 'opsurv.Rd': \usage lines wider than 90 characters: opsurv(x, y = NULL, model = "g", par = c(2.6e-06, 0.004, 1e-07, 0.1), cons = 1, usegr = F, usehs = F, debug = F, lb = c(1e-14, 1e-04, 0 ... [TRUNCATED] Rd file 'survwrapper.Rd': \usage lines wider than 90 characters: survwrapper(x, y = NULL, models = c("g", "gm", "l", "lm"), cx = rep(1, length(x)), cy = rep(1, length(y)), ext = F, n = length(c(x, y)) ... [TRUNCATED] These lines will be truncated in the PDF manual. * checking Rd cross-references ... WARNING Missing link or links in documentation object 'ezz.Rd': 'survgui' Missing link or links in documentation object 'modelshow.Rd': 'findpars' 'simdist' Missing link or links in documentation object 'opsurv.Rd': 'findpars' 'objf' See section 'Cross-references' in the 'Writing R Extensions' manual. * checking for missing documentation entries ... WARNING Undocumented code objects: 'checkcons' 'choosemodel' 'cpars' 'demog' 'empnull' 'fitmods' 'fixpar' 'gmean' 'grf' 'grf2' 'loadlr' 'mh' 'mledrv' 'modelinfo' 'modpars' 'objf' 'plot.summary.crqs' 'plot.survomatic' 'plotsurv' 'plotsurv.old' 'print.survomatic' 'qci' 'qsrv' 'sampler' 'sigmods' 'simsurv' 'smean' 'smoother' 'srvhaz' 'srvshp' 'summary.survomatic' 'survexp' 'survsumm' 't4253h' 'tab2raw' 'tidyfits' 'trypars' 'weibhaz' 'zpprob' 'zpprob.compiled' 'zptest' Undocumented data sets: 'ctrl' 'demo1' 'demo2' 'dex' 'dmodels' 'modelpars' '.models' 'references' All user-level objects in a package should have documentation entries. See chapter 'Writing R documentation files' in the 'Writing R Extensions' manual. * checking for code/documentation mismatches ... WARNING Functions or methods with usage in documentation object 'modelshow' but not in code: modelshow Codoc mismatches from documentation object 'ezz': ezz Code: function(d, d2 = NULL, g, c1 = NULL, c2 = NULL, quant = 0.9, step = 0.01, thresh = 0.05, gnames = NULL, noob = F, thetas = c(0.05, 0.95), debug = F, silent = F) Docs: function(d, d2 = NULL, g, quant = 0.9, step = 0.01, thresh = 0.05, gnames = NULL, noob = F, thetas = c(0.05, 0.95), debug = F) Argument names in code not in docs: c1 c2 silent Mismatches in argument names (first 3): Position: 4 Code: c1 Docs: quant Position: 5 Code: c2 Docs: step Position: 6 Code: quant Docs: thresh Codoc mismatches from documentation object 'opsurv': opsurv Code: function(x, y = 0, model = c("w", "g", "gm", "l", "lm"), par = c(2.6e-06, 0.004, 1e-07, 0.1), cons = 1, usegr = F, usehs = F, debug = F, lb = c(1e-14, 1e-04, 0, 0), ub = c(0.5, 0.5, 0.5, 2), cx = NULL, cy = NULL, giveup = Inf, mvers = "", method = "Nelder-Mead", tlog = F, getses = F, verbose = 0) Docs: function(x, y = NULL, model = "g", par = c(2.6e-06, 0.004, 1e-07, 0.1), cons = 1, usegr = F, usehs = F, debug = F, lb = c(1e-14, 1e-04, 0, 0), ub = c(0.5, 0.5, 0.5, 2), cx = NULL, cy = NULL, mvers = "", method = "Nelder-Mead", tlog = F) Argument names in code not in docs: giveup getses verbose Mismatches in argument names: Position: 13 Code: giveup Docs: mvers Position: 14 Code: mvers Docs: method Position: 15 Code: method Docs: tlog Mismatches in argument default values: Name: 'y' Code: 0 Docs: NULL Name: 'model' Code: c("w", "g", "gm", "l", "lm") Docs: "g" Codoc mismatches from documentation object 'survwrapper': survwrapper Code: function(x, y = NULL, cx = rep(1, length(x)), cy = rep(1, length(y)), forcemodel = NULL, ext = F, n = length(c(x, y)), AIC = F, BIC = F, breakties = "AIC", compare.matrix = NULL, constraint.matrix = NULL, thresh = 0.05, smooth = 7) Docs: function(x, y = NULL, models = c("g", "gm", "l", "lm"), cx = rep(1, length(x)), cy = rep(1, length(y)), ext = F, n = length(c(x, y)), AIC = F, BIC = F, breakties = "AIC", compare.matrix = NULL, constraint.matrix = NULL, thresh = 0.05, smooth = 7) Argument names in code not in docs: forcemodel Argument names in docs not in code: models Mismatches in argument names: Position: 3 Code: cx Docs: models Position: 4 Code: cy Docs: cx Position: 5 Code: forcemodel Docs: cy * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... NOTE File 'Survomatic/libs/Survomatic.so': Found 'printf', possibly from 'printf' (C) Object: 'ezz.o' Found 'putchar', possibly from 'putchar' (C) Object: 'ezz.o' Found 'puts', possibly from 'printf' (C), 'puts' (C) Object: 'haz.o' Found 'rand', possibly from 'rand' (C) Object: 'haz.o' File 'Survomatic/libs/Survomatic.so': Found no calls to: 'R_registerRoutines', 'R_useDynamicSymbols' Compiled code should not call entry points which might terminate R nor write to stdout/stderr instead of to the console, nor use Fortran I/O nor system RNGs. It is good practice to register native routines and to disable symbol search. See 'Writing portable packages' in the 'Writing R Extensions' manual. * checking examples ... ERROR Running examples in 'Survomatic-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: survwrapper > ### Title: Function for fitting and selecting hazard functions to survival > ### data. > ### Aliases: survwrapper > ### Keywords: survival ~kwd1 ~kwd2 > > ### ** Examples > > ## Generate two sets of survival times. > population1 <- simsurv(629,type='g',p=c(7.33e-4,0.1227,0,0)); > population2 <- + simsurv(574,type='lm',p=c(5.4818e-5,0.1543,0.0023,0.6018)); Error in .C("simsurv", a = as.double(p[1]), b = as.double(p[2]), c = as.double(p[3]), : "simsurv" not available for .C() for package "Survomatic" Calls: simsurv Execution halted * checking PDF version of manual ... OK * DONE Status: 1 ERROR, 6 WARNINGs, 4 NOTEs See '/00check.log' for details. Installation log: 00install.out
Build log for Windows (R 2.11.x)* checking for file 'Survomatic/DESCRIPTION' ... OK * preparing 'Survomatic': * checking DESCRIPTION meta-information ... OK * cleaning src * removing junk files * checking for LF line-endings in source and make files * checking for empty or unneeded directories * building binary distribution WARNING: some HTML links may not be found * installing *source* package 'Survomatic' ... ** libs making DLL ... gcc -I"c:/PROGRA~1/r/R-211~1.0/include" -O3 -Wall -std=gnu99 -c ezz.c -o ezz.o gcc -I"c:/PROGRA~1/r/R-211~1.0/include" -O3 -Wall -std=gnu99 -c haz.c -o haz.o haz.c: In function 'gl': haz.c:129: warning: unused variable 'sumc' haz.c: In function 'lmsrv2': haz.c:181: warning: unused variable 'denom' haz.c:180: warning: unused variable 'expcx' haz.c: In function 'srvshp': haz.c:187: warning: unused variable 'surv' haz.c: In function 'zptest': haz.c:228: warning: unused variable 'denom' haz.c: In function 'ggm': haz.c:112: warning: 'sumc' may be used uninitialized in this function haz.c:112: warning: 'sumb' may be used uninitialized in this function haz.c:112: warning: 'suma' may be used uninitialized in this function haz.c: In function 'gg': haz.c:96: warning: 'sumb' may be used uninitialized in this function haz.c:96: warning: 'suma' may be used uninitialized in this function haz.c: In function 'glm': haz.c:150: warning: 'sums' may be used uninitialized in this function haz.c:150: warning: 'sumc' may be used uninitialized in this function haz.c:150: warning: 'sumb' may be used uninitialized in this function haz.c:150: warning: 'suma' may be used uninitialized in this function haz.c: In function 'gl': haz.c:129: warning: 'sums' may be used uninitialized in this function haz.c:129: warning: 'sumb' may be used uninitialized in this function haz.c:129: warning: 'suma' may be used uninitialized in this function haz.c: In function 'gw': haz.c:79: warning: 'sumb' may be used uninitialized in this function haz.c:79: warning: 'suma' may be used uninitialized in this function gcc -shared -s -static-libgcc -o Survomatic.dll tmp.def ezz.o haz.o -Lc:/PROGRA~1/r/R-211~1.0/bin -lR installing to c:/tmp/Rinst228466799/Survomatic/libs ... done ** R ** data ** preparing package for lazy loading Loading required package: splines Warning: package 'quantreg' was built under R version 2.11.1 Loading required package: SparseM Package SparseM (0.85) loaded. To cite, see citation("SparseM") Attaching package: 'SparseM' The following object(s) are masked from 'package:base': backsolve Attaching package: 'quantreg' The following object(s) are masked from 'package:survival': untangle.specials The following object(s) are masked from 'package:utils': vignette ** help *** installing help indices ** building package indices ... ** MD5 sums ** testing if installed package can be loaded Survomatic 1.4.0.0 loaded packaged installation of 'Survomatic' as Survomatic_1.4.0.0.zip * DONE (Survomatic) Build log for Windows 64-bit (R 2.11.x)* checking for file 'Survomatic/DESCRIPTION' ... OK * preparing 'Survomatic': * checking DESCRIPTION meta-information ... OK * cleaning src * removing junk files * checking for LF line-endings in source and make files * checking for empty or unneeded directories * building binary distribution WARNING: some HTML links may not be found * installing *source* package 'Survomatic' ... ** libs making DLL ... x86_64-w64-mingw32-gcc -I"c:/PROGRA~1/r/R-211~1.0-X/include" -O2 -Wall -gdwarf-2 -std=gnu99 -c ezz.c -o ezz.o x86_64-w64-mingw32-gcc -I"c:/PROGRA~1/r/R-211~1.0-X/include" -O2 -Wall -gdwarf-2 -std=gnu99 -c haz.c -o haz.o haz.c: In function 'gl': haz.c:129:21: warning: unused variable 'sumc' haz.c: In function 'lmsrv2': haz.c:181:9: warning: unused variable 'denom' haz.c:180:63: warning: unused variable 'expcx' haz.c: In function 'srvshp': haz.c:187:24: warning: unused variable 'surv' haz.c: In function 'zptest': haz.c:228:16: warning: unused variable 'denom' haz.c: In function 'gw': haz.c:79:9: warning: 'suma' may be used uninitialized in this function haz.c:79:22: warning: 'sumb' may be used uninitialized in this function haz.c: In function 'gg': haz.c:96:9: warning: 'suma' may be used uninitialized in this function haz.c:96:22: warning: 'sumb' may be used uninitialized in this function haz.c: In function 'ggm': haz.c:112:9: warning: 'suma' may be used uninitialized in this function haz.c:112:22: warning: 'sumb' may be used uninitialized in this function haz.c:112:35: warning: 'sumc' may be used uninitialized in this function haz.c: In function 'gl': haz.c:129:9: warning: 'suma' may be used uninitialized in this function haz.c:129:15: warning: 'sumb' may be used uninitialized in this function haz.c:129:27: warning: 'sums' may be used uninitialized in this function haz.c: In function 'glm': haz.c:150:9: warning: 'suma' may be used uninitialized in this function haz.c:150:22: warning: 'sumb' may be used uninitialized in this function haz.c:150:35: warning: 'sumc' may be used uninitialized in this function haz.c:150:48: warning: 'sums' may be used uninitialized in this function x86_64-w64-mingw32-gcc -shared -static-libgcc -o Survomatic.dll tmp.def ezz.o haz.o -Lc:/PROGRA~1/r/R-211~1.0-X/bin -lR installing to c:/tmp/Rinst80492791/Survomatic/libs/x64 ... done ** R ** data ** preparing package for lazy loading Loading required package: splines Warning: package 'quantreg' was built under R version 2.11.1 Loading required package: SparseM Package SparseM (0.85) loaded. To cite, see citation("SparseM") Attaching package: 'SparseM' The following object(s) are masked from 'package:base': backsolve Attaching package: 'quantreg' The following object(s) are masked from 'package:survival': untangle.specials The following object(s) are masked from 'package:utils': vignette ** help *** installing help indices ** building package indices ... ** MD5 sums ** testing if installed package can be loaded Survomatic 1.4.0.0 loaded packaged installation of 'Survomatic' as Survomatic_1.4.0.0.zip * DONE (Survomatic) Build log for Mac OS X 10.5 (R 2.16.x)ERROR: dependencies 'quantreg', 'eha' are not available for package 'Survomatic' * removing '/Volumes/Tiger/Builds/rforge/Rlib/osx9-2.16/Survomatic' Build log for Windows 7 (R 3.0.x) (Survomatic 1.7.0.0) * installing to library 'z:/rforge/Rlib/win7-3.0' * installing *source* package 'Survomatic' ... ** libs *** arch - i386 gcc -m32 -I"C:/PROGRA~1/r/r-3.0/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O3 -Wall -std=gnu99 -mtune=core2 -c ezz.c -o ezz.o gcc -m32 -I"C:/PROGRA~1/r/r-3.0/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O3 -Wall -std=gnu99 -mtune=core2 -c haz.c -o haz.o haz.c: In function 'gl': haz.c:129:21: warning: unused variable 'sumc' [-Wunused-variable] haz.c: In function 'lmsrv2': haz.c:181:9: warning: unused variable 'denom' [-Wunused-variable] haz.c:180:63: warning: unused variable 'expcx' [-Wunused-variable] haz.c: In function 'srvshp': haz.c:187:24: warning: unused variable 'surv' [-Wunused-variable] haz.c: In function 'zptest': haz.c:228:16: warning: unused variable 'denom' [-Wunused-variable] haz.c: In function 'gw': haz.c:89:24: warning: 'sumb' may be used uninitialized in this function [-Wuninitialized] haz.c:89:9: warning: 'suma' may be used uninitialized in this function [-Wuninitialized] haz.c: In function 'gg': haz.c:106:24: warning: 'sumb' may be used uninitialized in this function [-Wuninitialized] haz.c:106:9: warning: 'suma' may be used uninitialized in this function [-Wuninitialized] haz.c: In function 'ggm': haz.c:124:39: warning: 'sumc' may be used uninitialized in this function [-Wuninitialized] haz.c:124:24: warning: 'sumb' may be used uninitialized in this function [-Wuninitialized] haz.c:124:9: warning: 'suma' may be used uninitialized in this function [-Wuninitialized] haz.c: In function 'gl': haz.c:144:39: warning: 'sums' may be used uninitialized in this function [-Wuninitialized] haz.c:144:24: warning: 'sumb' may be used uninitialized in this function [-Wuninitialized] haz.c:144:9: warning: 'suma' may be used uninitialized in this function [-Wuninitialized] haz.c: In function 'glm': haz.c:171:54: warning: 'sums' may be used uninitialized in this function [-Wuninitialized] haz.c:171:39: warning: 'sumc' may be used uninitialized in this function [-Wuninitialized] haz.c:171:24: warning: 'sumb' may be used uninitialized in this function [-Wuninitialized] haz.c:171:9: warning: 'suma' may be used uninitialized in this function [-Wuninitialized] gcc -m32 -shared -s -static-libgcc -o Survomatic.dll tmp.def ezz.o haz.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LC:/PROGRA~1/r/r-3.0/bin/i386 -lR installing to z:/rforge/Rlib/win7-3.0/Survomatic/libs/i386 *** arch - x64 gcc -m64 -I"C:/PROGRA~1/r/r-3.0/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c ezz.c -o ezz.o gcc -m64 -I"C:/PROGRA~1/r/r-3.0/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c haz.c -o haz.o haz.c: In function 'gl': haz.c:129:21: warning: unused variable 'sumc' [-Wunused-variable] haz.c: In function 'lmsrv2': haz.c:181:9: warning: unused variable 'denom' [-Wunused-variable] haz.c:180:63: warning: unused variable 'expcx' [-Wunused-variable] haz.c: In function 'srvshp': haz.c:187:24: warning: unused variable 'surv' [-Wunused-variable] haz.c: In function 'zptest': haz.c:228:16: warning: unused variable 'denom' [-Wunused-variable] haz.c: In function 'gw': haz.c:89:24: warning: 'sumb' may be used uninitialized in this function [-Wuninitialized] haz.c:89:9: warning: 'suma' may be used uninitialized in this function [-Wuninitialized] haz.c: In function 'gg': haz.c:106:24: warning: 'sumb' may be used uninitialized in this function [-Wuninitialized] haz.c:106:9: warning: 'suma' may be used uninitialized in this function [-Wuninitialized] haz.c: In function 'ggm': haz.c:124:39: warning: 'sumc' may be used uninitialized in this function [-Wuninitialized] haz.c:124:24: warning: 'sumb' may be used uninitialized in this function [-Wuninitialized] haz.c:124:9: warning: 'suma' may be used uninitialized in this function [-Wuninitialized] haz.c: In function 'gl': haz.c:144:39: warning: 'sums' may be used uninitialized in this function [-Wuninitialized] haz.c:144:24: warning: 'sumb' may be used uninitialized in this function [-Wuninitialized] haz.c:144:9: warning: 'suma' may be used uninitialized in this function [-Wuninitialized] haz.c: In function 'glm': haz.c:171:54: warning: 'sums' may be used uninitialized in this function [-Wuninitialized] haz.c:171:39: warning: 'sumc' may be used uninitialized in this function [-Wuninitialized] haz.c:171:24: warning: 'sumb' may be used uninitialized in this function [-Wuninitialized] haz.c:171:9: warning: 'suma' may be used uninitialized in this function [-Wuninitialized] gcc -m64 -shared -s -static-libgcc -o Survomatic.dll tmp.def ezz.o haz.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LC:/PROGRA~1/r/r-3.0/bin/x64 -lR installing to z:/rforge/Rlib/win7-3.0/Survomatic/libs/x64 ** R ** data ** preparing package for lazy loading Warning: replacing previous import 'untangle.specials' when loading 'quantreg' ** help *** installing help indices ** building package indices ** testing if installed package can be loaded *** arch - i386 Warning: replacing previous import 'untangle.specials' when loading 'quantreg' Warning: ignoring .First.lib() for package 'Survomatic' *** arch - x64 Warning: replacing previous import 'untangle.specials' when loading 'quantreg' Warning: ignoring .First.lib() for package 'Survomatic' * MD5 sums packaged installation of 'Survomatic' as Survomatic_1.7.0.0.zip * DONE (Survomatic) |