snippets - Code snippets, mostly visualization-related - check results
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Package R docs

Version: 0.1-1
Result: ERROR
Check time: 2018-01-26 16:24
* using log directory ''
* using R Under development (unstable) (2018-01-26 r74168)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: ISO8859-1
* using option '--as-cran'
* checking for file 'snippets/DESCRIPTION' ... OK
* this is package 'snippets' version '0.1-1'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... NOTE
Found the following hidden files and directories:
.git
These were most likely included in error. See section 'Package
structure' in the 'Writing R Extensions' manual.
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialized R objects in the sources ... OK
* checking whether package 'snippets' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
License components which are templates and need '+ file LICENSE':
MIT
Checking should be performed on sources prepared by 'R CMD build'.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... WARNING
Found the following directory with the name of a version control directory:
./.git
These should not be in a package tarball.
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
fd.matrix print.scheme setup.figure.gridColScheme
setup.figure.gridRowScheme
See section 'Registering S3 methods' in the 'Writing R Extensions'
manual.
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
.First.lib : : no visible global function definition for
'dev.cur'
.mfgrid: no visible global function definition for 'par'
.mfgrid: no visible global function definition for 'dev.cur'
.onLoad : : no visible global function definition for
'dev.cur'
.setup.figure.gridScheme: no visible global function definition for
'par'
add.labels: no visible global function definition for 'strwidth'
add.labels: no visible global function definition for 'strheight'
advance.scheme: no visible global function definition for 'dev.cur'
advance.scheme: no visible global function definition for 'par'
cloud: no visible global function definition for 'par'
cloud: no visible global function definition for 'plot'
cloud : : no visible global function definition for
'strwidth'
cloud : : no visible global function definition for
'strheight'
cloud : : no visible global function definition for 'text'
col.bbr : : no visible global function definition for 'rgb'
col.br : : no visible global function definition for 'rgb'
col.bw : : no visible global function definition for 'rgb'
col.bwr : : no visible global function definition for 'rgb'
data2screen: no visible global function definition for 'par'
fd.matrix: no visible global function definition for 'par'
fd.matrix : localAxis: no visible global function definition for 'Axis'
fd.matrix : localBox: no visible global function definition for 'box'
fd.matrix : localWindow: no visible global function definition for
'plot.window'
fd.matrix : localTitle: no visible global function definition for
'title'
fd.matrix: no visible global function definition for 'plot.new'
fd.matrix: no visible global function definition for 'rect'
mfcol: no visible global function definition for 'par'
mfrow: no visible global function definition for 'par'
osmap: no visible global function definition for 'par'
osmap: no visible global function definition for 'runif'
osmap : get.tile: no visible global function definition for
'download.file'
osmap: no visible global function definition for 'rasterImage'
osmap: no visible global function definition for 'rect'
osmap: no visible global function definition for 'rgb'
pop.scheme: no visible global function definition for 'dev.cur'
screen2data: no visible global function definition for 'par'
setup.figure: no visible global function definition for 'par'
Undefined global functions or variables:
Axis box dev.cur download.file par plot plot.new plot.window
rasterImage rect rgb runif strheight strwidth text title
Consider adding
importFrom("grDevices", "dev.cur", "rgb")
importFrom("graphics", "Axis", "box", "par", "plot", "plot.new",
"plot.window", "rasterImage", "rect", "strheight",
"strwidth", "text", "title")
importFrom("stats", "runif")
importFrom("utils", "download.file")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... ERROR
Running examples in 'snippets-Ex.R' failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fd
> ### Title: Fluctuation diagram
> ### Aliases: fd fd.matrix
> ### Keywords: hplot
>
> ### ** Examples
>
> ## this is best viewed on a wide-screen device...
> par(mfrow=c(1,2))
> for (sex in dimnames(HairEyeColor)$Sex)
+ fd(HairEyeColor[,,sex], main=sex)
Error in UseMethod("fd") :
no applicable method for 'fd' applied to an object of class "table"
Calls: fd
Execution halted
* checking PDF version of manual ... OK
* DONE

Status: 1 ERROR, 1 WARNING, 4 NOTEs
See
'/00check.log'
for details.


Installation log: 00install.out

Distribution log

SVN checkout/GIT clone log


Build log for Windows (R 2.11.x)

* checking for file 'snippets/DESCRIPTION' ... OK
* preparing 'snippets':
* checking DESCRIPTION meta-information ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building binary distribution
WARNING: some HTML links may not be found
* installing *source* package 'snippets' ...
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** MD5 sums
** testing if installed package can be loaded
packaged installation of 'snippets' as snippets_0.1-0.zip

* DONE (snippets)


Build log for Windows 64-bit (R 2.11.x)

* checking for file 'snippets/DESCRIPTION' ... OK
* preparing 'snippets':
* checking DESCRIPTION meta-information ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building binary distribution
WARNING: some HTML links may not be found
* installing *source* package 'snippets' ...
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** MD5 sums
** testing if installed package can be loaded
packaged installation of 'snippets' as snippets_0.1-0.zip

* DONE (snippets)


Build log for Mac OS X 10.5 (R 2.16.x)

* installing *source* package 'snippets' ...
** Creating default NAMESPACE file
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
*** arch - i386
*** arch - ppc
*** arch - x86_64
packaged installation of 'snippets' as 'snippets_0.1-0.tgz'

* DONE (snippets)

Build log for Windows 7 (R 3.0.x)

(snippets 0.1-0)
* installing to library 'z:/rforge/Rlib/win7-3.0'
* installing *source* package 'snippets' ...
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
*** arch - i386
Warning: ignoring .First.lib() for package 'snippets'
*** arch - x64
Warning: ignoring .First.lib() for package 'snippets'
* MD5 sums
packaged installation of 'snippets' as snippets_0.1-0.zip
* DONE (snippets)