pcurve - Principal curve analysis - check results
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pcurve

About pcurve
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Package R docs

Version: 0.6-5
Result: OK
Check time: 2018-01-26 15:57
* using log directory ''
* using R Under development (unstable) (2018-01-26 r74168)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: ISO8859-1
* using option '--as-cran'
* checking for file 'pcurve/DESCRIPTION' ... OK
* this is package 'pcurve' version '0.6-5'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialized R objects in the sources ... OK
* checking whether package 'pcurve' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... NOTE
'library' or 'require' calls to packages already attached by Depends:
'mgcv' 'vegan'
Please remove these calls from your code.
* checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
print.gd
See section 'Registering S3 methods' in the 'Writing R Extensions'
manual.
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
finder : pc.fin: no visible global function definition for 'par'
finder : pc.fin: no visible global function definition for 'mtext'
finder : pc.fin: no visible global function definition for 'plot'
finder : pc.fin: no visible global function definition for 'lines'
finder : pc.fin: no visible global function definition for 'abline'
finder : pc.fin: no visible global function definition for 'locator'
finder: no visible global function definition for 'plot'
finder: no visible global function definition for 'points'
finder: no visible global function definition for 'abline'
finder: no visible global function definition for 'identify'
finder: no visible global function definition for 'locator'
pcchisq.plt: no visible global function definition for 'plot'
pcchisq.plt: no visible global function definition for 'text'
pcchisq.plt: no visible global function definition for 'mtext'
pcdiags.plt: no visible global function definition for 'menu'
pcdiags.plt: no visible global function definition for 'locator'
pcdists.plt: no visible global function definition for 'par'
pcdists.plt: no visible global function definition for 'plot'
pcdists.plt: no visible global function definition for 'abline'
pcenv.plt: no visible global function definition for 'par'
pcenv.plt: no visible global function definition for 'plot'
pcenv.plt: no visible global function definition for 'text'
pcenv.plt: no visible global function definition for 'lines'
pcenv.plt: no visible global function definition for 'locator'
pcfinder.plt: no visible global function definition for 'plot'
pcfinder.plt: no visible global function definition for 'points'
pcfinder.plt: no visible global function definition for 'mtext'
pcfinder.plt: no visible global function definition for 'abline'
pcflip.plt: no visible global function definition for 'text'
pcflip.plt: no visible global function definition for 'mtext'
pcflip.plt: no visible global function definition for 'segments'
pcflip.plt: no visible global function definition for 'lines'
pcflip.plt: no visible global function definition for 'locator'
pchist.plt: no visible global function definition for 'par'
pchist.plt: no visible global function definition for 'hist'
pcqqnorm.plt: no visible global function definition for 'par'
pcqqnorm.plt: no visible global function definition for 'plot'
pcqqnorm.plt: no visible global function definition for 'text'
pcqqnorm.plt: no visible global function definition for 'locator'
pcres1.plt: no visible global function definition for 'par'
pcres1.plt: no visible global function definition for 'plot'
pcres1.plt: no visible global function definition for 'abline'
pcres1.plt: no visible global function definition for 'locator'
pcres2.plt: no visible global function definition for 'par'
pcres2.plt: no visible global function definition for 'plot'
pcres2.plt: no visible global function definition for 'abline'
pcres2.plt: no visible global function definition for 'lines'
pcres2.plt: no visible global function definition for 'locator'
pcresid.plt: no visible global function definition for 'par'
pcresid.plt: no visible global function definition for 'plot'
pcresid.plt: no visible global function definition for 'text'
pcresid.plt: no visible global function definition for 'mtext'
pcresid.plt: no visible global function definition for 'lines'
pcresid.plt: no visible global function definition for 'abline'
pcresid.plt: no visible global function definition for 'locator'
pcresp.plt: no visible global function definition for 'par'
pcresp.plt: no visible global function definition for 'plot'
pcresp.plt: no visible global function definition for 'text'
pcresp.plt: no visible global function definition for 'lines'
pcresp.plt: no visible global function definition for 'locator'
pcurve: no visible global function definition for 'par'
pcurve: no visible global function definition for 'plot'
pcurve: no visible global function definition for 'lines'
pcurve: no visible global function definition for 'mtext'
pcurve: no visible global function definition for 'locator'
pcurve: no visible global function definition for 'segments'
pcurve: no visible global function definition for 'abline'
Undefined global functions or variables:
abline hist identify lines locator menu mtext par plot points
segments text
Consider adding
importFrom("graphics", "abline", "hist", "identify", "lines",
"locator", "mtext", "par", "plot", "points", "segments",
"text")
importFrom("utils", "menu")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... NOTE
File 'pcurve/libs/pcurve.so':
Found no calls to: 'R_registerRoutines', 'R_useDynamicSymbols'

It is good practice to register native routines and to disable symbol
search.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE

Status: 4 NOTEs
See
'/00check.log'
for details.



Installation log: 00install.out

Distribution log

SVN checkout/GIT clone log