opencpu
About opencpu
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News/Changelog2.2.4- As per CRAN demands, the config file for the single-user server is now stored in tools::R_user_dir('opencpu', `config') 2.2.3 - On MacOS the png output type is no longer hardcoded to `cairo' to accomodate cairo-less builds. 2.2.2 - On R 4.0 the location where the user config file for the single-user server is stored is now changed to comply with new CRAN policies. 2.2.1 - Fix webhook for non-master default branch 2.2.0 - Bump version because we are now targeting R 4.0 - Add option to disable SSL in SMTP for webhook emails 2.1.7 - Workaround for broken psockcluster in RStudio on MacOS 2.1.6 - Added new graphics output format `svglite' 2.1.5 - The /ocpu/library API now includes loaded namespaces - Do not attempt anymore to unload preloaded packages 2.1.4 - Do not initiate config during check/testload to comply with CRAN policy 2.1.3 - Replace sendmailR with new curl::send_mail() - Bump and stack update for R 3.6.1 2.1.2 - Fix parsing for length 1 matrix objects parameters - Version bump for R 3.6.0 2.1.1 - Replace sys::eval_safe() with unix::eval_safe() 2.1.0 - Replace devtools dependency with remotes - Cloud server: always keep ocpu system lib on the path 2.0.9 - Webhook now uses temporary folder inside destination folder #316 2.0.8 - Increase default key length to 13 to prevent hash collisions - Docker: start cron daemon by default - Cloud server: remove dependency on libcurl3 for Ubuntu Bionic - Cloud server: update package library - Docker / Launchpad: update rstudio-server - Docker: workaround bug in rstudio (explicitly disable apparmor) - rapache handler now properly closes sink() even in case of system errors - fix regression from security patch: catch timeout errors 2.0.7 - Internally switch to condition system to raise ocpu-success - Move all reading of files inside the forked process - Check for path traversal for GET requests. Note that you should really enable AppArmor in production. - Faster serialization in sys::eval_save() in sys 1.6 2.0.6 - Support auth_token in webhook (either set /etc/opencpu/secret.conf or GITHUB_PAT in /etc/opencpu/Renviron) - Pass down `rapache' option to webhook installer process to load proper config files 2.0.5 - Fix bug where only the first package would actually get preloaded - The /ocpu/info API shows some additional config/system info 2.0.4 - Single user server: flush.console() after printing logs to the console - Single user server: kill child process if a worker hits timeout - Support JSON null values for rlimits in config - Add URL parameter 'mail_owner' to webhook url (default is TRUE) - Cloud server: automatically add libjvm path to ldpaths 2.0.3.1 (internal) - Removed the manual call to gc() at the end of each request because it is very slow 2.0.3 - Much improved support for UTF-8 (requires updated webutils' and evaluate') - Multipart requests now support binary form-data fields in 'appplication/rds', 'application/rprotobuf', or 'application/json' types. This makes it easier to push objects from client-server or server-server. - RApache: use webutils instead of apreq to parse request body. - Single user server: fix for empty POST requests with no 'Content-Length' header - Ignore double slashes in URL - Support pkg::object and session::object alias for ./R/object - Added a `strings' data object for testing character encodings - Add support for `haven' output types 2.0.2 - Hotfix release for performance regression in cloud server (#239) 2.0.1 - ocpu_start_app() now automatically checks for app updates if online - Fix for posting scripts (empty args) - Support figures with error messages (for invalid graphic parameters) - linux: show informative error message when tmp dir cannot be created - opencpu-cache: require at least version 1.12 of nginx (fixes HTTP/2 bug) - fix year of paper in citation file - fix link to pdf manual in test page - Add parameter 'no_cache' to single user server for development - HTTP OPTIONS now returns 'Access-Control-Allow-Methods' header for CORS preflight - Better email notification: to=pusher, cc=owner, bcc=archive - Webhook: use sys pkg instead of system2 for running rscript - Webhook: make email sending more robust - Internal function trigger_webhook() to test webhook (should move to client pkg) - Remove `public.url' from server.conf - Add 'update_apps()' function for convenience 2.0 - Major rewrite :) 1.6.2 - Fix for /man/html (use tools::Rd2HTML) 1.6.1 - Fix bug to support non interactive: Rscript -e 'opencpu::opencpu$debug(4000)' - Suggest: feather 1.6.0 - Workaround for unloadNamespace bug in R 3.3.0 1.5.6 - Lazy load import packages using pkg::name instead of importFrom() 1.5.5 - Replace RProtoBuf' dependency with protolite' 1.5.4 - Bump version to sync with cloud server - Workaround in eval_fork for mccollect race condition bug 1.4.8 - Fix for case sensitive Github usernames 1.4.7 - Support Auth over CORS 1.4.6 - Add a CITATION file - Fix for new rhttpd system in R 3.2.0 1.4.4 - Add support for "Accept" request header - Update /man/html stylesheet - Add back support for URL parameters - Only use AppArmor if available - Add default robots.txt and favicon to cloud server - Cloud server now sets HOME envvar to tempdir() - Add support for x12345::foo arguments - Remove ocpu_tmp_ prefix for session directories in tmp_library - Bunch of internal changes to support Fedora/Redhat RPM packages 1.4.3 - Add support for application/json payloads for Github webhooks - Disable forks in OSX (again) due to issues with rJava - Disable unloading of packages in eval_current due to issues with rJavas - Fix for eol in csv/tab output on Windows - Fix for hash collisions with large amounts of sessions - Add whitepaper vignette and url to package 1.4.2 - Bug fix for JSON input data - Bump jsonlite depends to 0.9.8 1.4.1 - Make session-key lenght configurable, default to 9. 1.4.0 - HTTP 201 301 302 now uses absolute URL in Location header - Don't print call for internal stop() errors - Change vignette builder to knitr - Update devtools and httr dependencies - Replace CR+LF by LF before parsing code snippets - Add support for index.html in package root dir - Disable compression in storring sessions to gain speed - Clean up parsing code 1.2.3 - Add support for private github repositories using access token authentication. - Use ~/.opencpu.conf as primary config file for single user server. - Disable hyperlinks in HTML man pages. - Bug fix for rscripts on the cloud server. - Experimental support for dot-dot-dot arguments. 1.2.2 - Don't send attachement header for SVG anymore. - Upgrade rApache to 1.2.5: avoid receiveBin() when apreq alread parsed - Start using HTTP 405 instead of 400 for invalid methods 1.2.1 - Use latest version of jsonlite - Better support for lazy load data API - Moved CRON scripts to update cran, bioc, github libraries inside the package - Use rstudio proxy when single-user server is loaded in rstudio-server. 1.2.0 - Replaced dependency RJSONIO with jsonlite for all toJSON/fromJSON - Add support for pkg/data API - Improve CI email notifications - add /console shortcut - correct MIME headers for fonts 1.0.7 - Adding Github CI stuff - New config parameters: "public.url" and "smtp.server", "timelimit.webhook" 1.0.6 - Version bump for CRAN release. - Detect /ocpu/user libraries from /etc/passwd. 1.0.5 - Don't fork on MAC for "safe" requests (to reduce risk of fork issues) - Temporary change fork method to psock method on OSX because of problems in Mavericks. - Adding opencpu$view() to take advantage of Rstudio viewing panel if available - Set quick=true for install_github - Use bitmapType="cairo" if available - Temporary implementation of HTTP OPTIONS for CORS in chrome. - Adding Access-Control-Allow-Headers and Access-Control-Expose-Headers to support CORS preflighting. 1.0.4 - Fixed bug when timeout > 60s (reported by Jordy Coolen) - Fixed nginx warning in the cloud server - Upgrade evaluate to 0.5.1 - Add support for Apache 2.4 / Ubuntu Saucy in cloud server with mpm_prefork 1.0.3 - Invisible return values are now stored but not printed - Dependency update to evaluate 0.4.10 1.0.2 - Capture output for install.packages, install_github and biocInstaller - Remove rapache library change in onAttach 1.0.1 - Fix bugs for uploading files - Fix bugs for storing files from a session - Set default bitmap type to Cairo (to prevent problems with forks on MAC) |