multicore - Parallel processing in R on machines with multiple cores or CPUs - check results
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multicore

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Package R docs

 Version: 0.1-8
Result: WARNING
Check time: 2018-01-26 21:50
* using log directory ''
* using R Under development (unstable) (2018-01-26 r74168)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: ISO8859-1
* using option '--as-cran'
* checking for file 'multicore/DESCRIPTION' ... OK
* this is package 'multicore' version '0.1-8'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialized R objects in the sources ... OK
* checking whether package 'multicore' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
collect: no visible binding for global variable 'str'
Undefined global functions or variables:
str
Consider adding
importFrom("utils", "str")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... WARNING
File 'multicore/libs/multicore.so':
Found 'exit', possibly from 'exit' (C)
Object: 'fork.o'
File 'multicore/libs/multicore.so':
Found no calls to: 'R_registerRoutines', 'R_useDynamicSymbols'

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs.
It is good practice to register native routines and to disable symbol
search.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking examples ... OK
Examples with CPU or elapsed time > 5s
user system elapsed
pvec 47.956 5.804 9.132
mclapply 36.540 1.448 5.942
parallel 5.040 0.308 0.019
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 1 NOTE
See
'/00check.log'
for details.


Installation log: 00install.out

Distribution log

SVN checkout/GIT clone log

Build log for Windows (R 2.11.x)

* checking for file 'multicore/DESCRIPTION' ... OK
* preparing 'multicore':
* checking DESCRIPTION meta-information ... OK
* cleaning src
make: Nothing to be done for `clean'.
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building binary distribution
WARNING: some HTML links may not be found
* installing *source* package 'multicore' ...
** libs
making DLL ...
gcc -I"c:/PROGRA~1/r/R-211~1.0/include" -O3 -Wall -std=gnu99 -c fork.c -o fork.o
gcc -I"c:/PROGRA~1/r/R-211~1.0/include" -O3 -Wall -std=gnu99 -c forknt.c -o forknt.o
forknt.c:18: warning: ignoring #pragma mark ntdll
forknt.c:96: warning: ignoring #pragma mark ntdll
forknt.c:160: warning: ignoring #pragma mark
forknt.c:217: warning: ignoring #pragma mark
gcc -I"c:/PROGRA~1/r/R-211~1.0/include" -O3 -Wall -std=gnu99 -c winfix.c -o winfix.o
gcc -shared -s -static-libgcc -o multicore.dll tmp.def fork.o forknt.o winfix.o -lwsock32 -Lc:/PROGRA~1/r/R-211~1.0/bin -lR
installing to c:/tmp/Rinst84067208/multicore/libs
... done
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** MD5 sums
** testing if installed package can be loaded
packaged installation of 'multicore' as multicore_0.1-4.zip

* DONE (multicore)

Build log for Windows 64-bit (R 2.11.x)

* checking for file 'multicore/DESCRIPTION' ... OK
* preparing 'multicore':
* checking DESCRIPTION meta-information ... OK
* cleaning src
make: Nothing to be done for `clean'.
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building binary distribution
WARNING: some HTML links may not be found
* installing *source* package 'multicore' ...
** libs
making DLL ...
x86_64-w64-mingw32-gcc -I"c:/PROGRA~1/r/R-211~1.0-X/include" -O2 -Wall -gdwarf-2 -std=gnu99 -c fork.c -o fork.o
fork.c: In function 'rm_child_':
fork.c:86:21: warning: cast to pointer from integer of different size
x86_64-w64-mingw32-gcc -I"c:/PROGRA~1/r/R-211~1.0-X/include" -O2 -Wall -gdwarf-2 -std=gnu99 -c forknt.c -o forknt.o
forknt.c:18:0: warning: ignoring #pragma mark ntdll
forknt.c:96:0: warning: ignoring #pragma mark ntdll
forknt.c:160:0: warning: ignoring #pragma mark
forknt.c:217:0: warning: ignoring #pragma mark
forknt.c: In function 'fork':
forknt.c:240:9: error: 'CONTEXT' has no member named 'Eip'
forknt.c:240:16: warning: cast from pointer to integer of different size
forknt.c:243:57: error: 'CONTEXT' has no member named 'Esp'
forknt.c:266:9: warning: cast from pointer to integer of different size
make: *** [forknt.o] Error 1
... done
ERROR: compilation failed for package 'multicore'
* removing 'c:/tmp/Rinst203621606/multicore'
ERROR
* installation failed

Build log for Mac OS X 10.5 (R 2.16.x)

* installing *source* package 'multicore' ...
** libs
*** arch - i386
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c fork.c -o fork.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c forknt.c -o forknt.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c perf.c -o perf.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c winfix.c -o winfix.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o multicore.so fork.o forknt.o perf.o winfix.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Tiger/Builds/rforge/Rlib/osx9-2.16/multicore/libs/i386
*** arch - ppc
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c fork.c -o fork.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c forknt.c -o forknt.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c perf.c -o perf.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c winfix.c -o winfix.o
gcc -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o multicore.so fork.o forknt.o perf.o winfix.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Tiger/Builds/rforge/Rlib/osx9-2.16/multicore/libs/ppc
*** arch - x86_64
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c fork.c -o fork.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c forknt.c -o forknt.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c perf.c -o perf.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c winfix.c -o winfix.o
gcc -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o multicore.so fork.o forknt.o perf.o winfix.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Tiger/Builds/rforge/Rlib/osx9-2.16/multicore/libs/x86_64
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
*** arch - i386
*** arch - ppc
*** arch - x86_64
packaged installation of 'multicore' as 'multicore_0.1-8.tgz'

* DONE (multicore)

Build log for Windows 7 (R 3.0.x)

(multicore 0.1-8)
* installing to library 'z:/rforge/Rlib/win7-3.0'
ERROR: Unix-only package
* removing 'z:/rforge/Rlib/win7-3.0/multicore'