JavaGD

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Package R docs

Version: 0.6-5
Result: OK
Check time: 2022-11-29 22:49

* using log directory ‘’
* using R Under development (unstable) (2022-11-28 r83388)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--as-cran’
* checking for file ‘JavaGD/DESCRIPTION’ ... OK
* this is package ‘JavaGD’ version ‘0.6-5’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘JavaGD’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in shell scripts ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... NOTE
GNU make is a SystemRequirements.
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking include directives in Makefiles ... NOTE
Found the following Makefile(s) with an include directive with a pathname using R_HOME:
src/jvm-w32/Makefile
Even though not recommended, variable R_HOME may contain spaces.
Makefile directives use space as a separator and there is no portable
way to quote/escape the space in Make rules and directives. However,
one can and should quote pathnames when passed from Makefile to the
shell, and this can be done specifically when invoking Make recursively.
It is therefore recommended to use the Make '-f' option to include files
in directories specified using R_HOME. This option can be specified
multiple times to include multiple Makefiles. Note that 'Makeconf' is
included automatically into top-level makefile of a package.
More information can be found in 'Writing R Extensions'.
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 2 NOTEs
See
‘/00check.log’
for details.

Installation log: 00install.out

Distribution log

SVN checkout/GIT clone log

Build log for Windows (R 2.11.x)

* checking for file 'JavaGD/DESCRIPTION' ... OK
* preparing 'JavaGD':
* checking DESCRIPTION meta-information ... OK
* cleaning src
Makevars.win:5: Makevars.java: No such file or directory
make: *** No rule to make target `Makevars.java'. Stop.
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building binary distribution
WARNING: some HTML links may not be found
* installing *source* package 'JavaGD' ...
Generate Windows-specific files (src/jvm-w32) ...
make: Entering directory `/cygdrive/c/tmp/Rbuild12898135/JavaGD/src/jvm-w32'
dlltool --input-def jvm.def --kill-at --dllname jvm.dll --output-lib libjvm.dll.a
gcc -O2 -c -o findjava.o findjava.c
gcc -s -o findjava.exe findjava.o
gcc -O2 -c -o WinRegistry.o WinRegistry.c -Ic:/PROGRA~1/r/R-211~1.0/include
WinRegistry.c: In function 'RegGetStrValue':
WinRegistry.c:13: warning: initialization discards qualifiers from pointer target type
WinRegistry.c:14: warning: initialization discards qualifiers from pointer target type
gcc --shared -s -o WinRegistry.dll WinRegistry.o -lR -Lc:/PROGRA~1/r/R-211~1.0/src/gnuwin32 -Lc:/PROGRA~1/r/R-211~1.0/bin
make: Leaving directory `/cygdrive/c/tmp/Rbuild12898135/JavaGD/src/jvm-w32'
Find Java...
JAVA_HOME=C:/jdk1.6
Install WinRegistry
Configuration done.
** libs
making DLL ...
gcc -I"c:/PROGRA~1/r/R-211~1.0/include" -D_R_ -DWin32 -Ic:/PROGRA~1/r/R-211~1.0/src/include -IC:/jdk1.6/include -IC:/jdk1.6/include/win32 -Iinclude/Win32 -O3 -Wall -std=gnu99 -c jGDtalk.c -o jGDtalk.o
jGDtalk.c: In function 'getJNIEnv':
jGDtalk.c:120: warning: dereferencing type-punned pointer will break strict-aliasing rules
jGDtalk.c: In function 'initJVM':
jGDtalk.c:647: warning: dereferencing type-punned pointer will break strict-aliasing rules
jGDtalk.c: At top level:
jGDtalk.c:246: warning: 'newJavaGD_Hold' defined but not used
gcc -I"c:/PROGRA~1/r/R-211~1.0/include" -D_R_ -DWin32 -Ic:/PROGRA~1/r/R-211~1.0/src/include -IC:/jdk1.6/include -IC:/jdk1.6/include/win32 -Iinclude/Win32 -O3 -Wall -std=gnu99 -c javaGD.c -o javaGD.o
gcc -I"c:/PROGRA~1/r/R-211~1.0/include" -D_R_ -DWin32 -Ic:/PROGRA~1/r/R-211~1.0/src/include -IC:/jdk1.6/include -IC:/jdk1.6/include/win32 -Iinclude/Win32 -O3 -Wall -std=gnu99 -c s2u.c -o s2u.o
gcc -shared -s -static-libgcc -o JavaGD.dll tmp.def jGDtalk.o javaGD.o s2u.o -ljvm.dll -L/src -Ljvm-w32 -L. -Lc:/PROGRA~1/r/R-211~1.0/bin -lR
installing to c:/tmp/Rinst12876611/JavaGD/libs
... done
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** MD5 sums
** testing if installed package can be loaded
packaged installation of 'JavaGD' as JavaGD_0.5-3.zip

* DONE (JavaGD)

Build log for Windows 64-bit (R 2.11.x)

Build log for Mac OS X 10.5 (R 2.16.x)

* installing *source* package 'JavaGD' ...
checking for gcc... gcc -arch i386 -std=gnu99
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc -arch i386 -std=gnu99 accepts -g... yes
checking for gcc -arch i386 -std=gnu99 option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -arch i386 -std=gnu99 -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... rm: conftest.dSYM: is a directory
rm: conftest.dSYM: is a directory
yes
checking for sys/wait.h that is POSIX.1 compatible... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for string.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking for unistd.h... (cached) yes
checking for an ANSI C-conforming const... yes
checking whether time.h and sys/time.h may both be included... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking return type of signal handlers... void
checking for memset... yes
checking for mkdir... yes
checking for rmdir... yes
checking for select... yes
checking for socket... yes
checking endianess... intel-like
checking for java... /usr/bin/java
checking Java environment home... in /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home
checking for /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/include/jni.h... yes
checking for /System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/include/./jni_md.h... yes
checking whether JNI programs can be compiled... yes
checking JNI data types... ok
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating R/zzz.R
config.status: creating src/config.h
** Creating default NAMESPACE file
** libs
*** arch - i386
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -DNDEBUG -I/usr/local/include -I/Library/Frameworks/R.framework/Resources/Headers -I/Library/Frameworks/R.framework/Resources/PrivateHeaders -I/System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/include -I/System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/include/. -Iinclude -fPIC -g -O2 -c jGDtalk.c -o jGDtalk.o
In file included from javaGD.h:12,
from jGDtalk.c:1:
/Library/Frameworks/R.framework/Resources/include/R_ext/GraphicsDevice.h:39:4: error: #error R_ext/GraphicsEngine.h must be included first, and includes this header
In file included from javaGD.h:12,
from jGDtalk.c:1:
/Library/Frameworks/R.framework/Resources/include/R_ext/GraphicsDevice.h:216: warning: type defaults to 'int' in declaration of 'pGEcontext'
/Library/Frameworks/R.framework/Resources/include/R_ext/GraphicsDevice.h:216: error: expected ';', ',' or ')' before 'gc'
/Library/Frameworks/R.framework/Resources/include/R_ext/GraphicsDevice.h:235: error: expected ';' before 'void'
In file included from jGDtalk.c:1:
javaGD.h:14:23: error: Rgraphics.h: No such file or directory
javaGD.h:15:22: error: Rdevices.h: No such file or directory
In file included from jGDtalk.c:1:
javaGD.h:68: error: expected ')' before '*' token
In file included from jGDtalk.c:2:
jGDtalk.h:10: error: expected ')' before '*' token
jGDtalk.h:12: error: expected ')' before '*' token
jGDtalk.c:31: error: expected ')' before '*' token
jGDtalk.c:34: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c:36: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c:37: error: expected ')' before '*' token
jGDtalk.c:38: error: expected ')' before '*' token
jGDtalk.c:39: error: expected ')' before '*' token
jGDtalk.c:40: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c:43: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c:47: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c:48: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c:49: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c:50: error: expected ')' before '*' token
jGDtalk.c:54: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c:57: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c:60: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c:63: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c:66: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c:70: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c:164: error: expected ')' before '*' token
jGDtalk.c:177: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c: In function 'newJavaGD_Circle':
jGDtalk.c:179: error: 'dd' undeclared (first use in this function)
jGDtalk.c:179: error: (Each undeclared identifier is reported only once
jGDtalk.c:179: error: for each function it appears in.)
jGDtalk.c: At top level:
jGDtalk.c:192: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c: In function 'newJavaGD_Clip':
jGDtalk.c:194: error: 'dd' undeclared (first use in this function)
jGDtalk.c: At top level:
jGDtalk.c:205: error: expected ')' before '*' token
jGDtalk.c:218: error: expected ')' before '*' token
jGDtalk.c:231: error: expected ')' before '*' token
jGDtalk.c:244: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c: In function 'newJavaGD_Locator':
jGDtalk.c:246: error: 'dd' undeclared (first use in this function)
jGDtalk.c: At top level:
jGDtalk.c:273: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c: In function 'newJavaGD_Line':
jGDtalk.c:275: error: 'dd' undeclared (first use in this function)
jGDtalk.c: At top level:
jGDtalk.c:288: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c: In function 'newJavaGD_MetricInfo':
jGDtalk.c:290: error: 'dd' undeclared (first use in this function)
jGDtalk.c: At top level:
jGDtalk.c:315: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c: In function 'newJavaGD_Mode':
jGDtalk.c:317: error: 'dd' undeclared (first use in this function)
jGDtalk.c: At top level:
jGDtalk.c:328: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c: In function 'newJavaGD_NewPage':
jGDtalk.c:330: error: 'dd' undeclared (first use in this function)
jGDtalk.c:337: warning: implicit declaration of function 'devNumber'
jGDtalk.c: At top level:
jGDtalk.c:347: error: expected ')' before '*' token
jGDtalk.c:401: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c: In function 'newJavaGD_Polygon':
jGDtalk.c:403: error: 'dd' undeclared (first use in this function)
jGDtalk.c: At top level:
jGDtalk.c:424: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c: In function 'newJavaGD_Polyline':
jGDtalk.c:426: error: 'dd' undeclared (first use in this function)
jGDtalk.c: At top level:
jGDtalk.c:448: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c: In function 'newJavaGD_Rect':
jGDtalk.c:450: error: 'dd' undeclared (first use in this function)
jGDtalk.c: At top level:
jGDtalk.c:464: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c: In function 'newJavaGD_Size':
jGDtalk.c:466: error: 'dd' undeclared (first use in this function)
jGDtalk.c: At top level:
jGDtalk.c:491: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c: In function 'newJavaGD_StrWidth':
jGDtalk.c:493: error: 'dd' undeclared (first use in this function)
jGDtalk.c: At top level:
jGDtalk.c:510: error: expected declaration specifiers or '...' before 'NewDevDesc'
jGDtalk.c: In function 'newJavaGD_Text':
jGDtalk.c:512: error: 'dd' undeclared (first use in this function)
jGDtalk.c: At top level:
jGDtalk.c:534: error: expected ')' before '*' token
make: *** [jGDtalk.o] Error 1
ERROR: compilation failed for package 'JavaGD'
* removing '/Volumes/Tiger/Builds/rforge/Rlib/osx9-2.16/JavaGD'
* restoring previous '/Volumes/Tiger/Builds/rforge/Rlib/osx9-2.16/JavaGD'

Build log for Windows 7 (R 3.0.x)

(JavaGD 0.6-1)
- building i386
* installing to library 'z:/rforge/Rlib/win7-3.0'
* installing *source* package 'JavaGD' ...
Generate Windows-specific files (src/jvm-w32) ...
make: Entering directory `/cygdrive/c/tmp/RtmpGg7lAI/R.INSTALL3c8646e5723/JavaGD/src/jvm-w32'
dlltool --as as -m i386 --as-flags --32 --input-def jvm.def --kill-at --dllname jvm.dll --output-lib libjvm.dll.a
gcc -m32 -O2 -c -o findjava.o findjava.c
gcc -m32 -s -o findjava.exe findjava.o
make: Leaving directory `/cygdrive/c/tmp/RtmpGg7lAI/R.INSTALL3c8646e5723/JavaGD/src/jvm-w32'
Find Java...
JAVA_HOME=C:/JDK1~1.6-I
Configuration done.
** libs
Warning: this package has a non-empty 'configure.win' file,
so building only the main architecture

gcc -m32 -I"C:/PROGRA~1/r/r-3.0/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -D_R_ -DWin32 -I/src/include -IC:/JDK1~1.6-I/include -IC:/JDK1~1.6-I/include/win32 -Iinclude/Win32 -O3 -Wall -std=gnu99 -mtune=core2 -c jGDtalk.c -o jGDtalk.o
jGDtalk.c:250:13: warning: 'newJavaGD_Hold' defined but not used [-Wunused-function]
gcc -m32 -I"C:/PROGRA~1/r/r-3.0/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -D_R_ -DWin32 -I/src/include -IC:/JDK1~1.6-I/include -IC:/JDK1~1.6-I/include/win32 -Iinclude/Win32 -O3 -Wall -std=gnu99 -mtune=core2 -c javaGD.c -o javaGD.o
gcc -m32 -I"C:/PROGRA~1/r/r-3.0/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -D_R_ -DWin32 -I/src/include -IC:/JDK1~1.6-I/include -IC:/JDK1~1.6-I/include/win32 -Iinclude/Win32 -O3 -Wall -std=gnu99 -mtune=core2 -c s2u.c -o s2u.o
gcc -m32 -shared -s -static-libgcc -o JavaGD.dll tmp.def jGDtalk.o javaGD.o s2u.o -ljvm.dll -L/src -Ljvm-w32 -L. -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LC:/PROGRA~1/r/r-3.0/bin/i386 -lR
installing to z:/rforge/Rlib/win7-3.0/JavaGD/libs/i386
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (JavaGD)

- building x64
* installing to library 'z:/rforge/Rlib/win7-3.0'
* installing *source* package 'JavaGD' ...
Generate Windows-specific files (src/jvm-w32) ...
make: Entering directory `/cygdrive/c/tmp/RtmpOkRbne/R.INSTALL6c851921c1c/JavaGD/src/jvm-w32'
dlltool --as as -m i386:x86-64 --as-flags --64 --input-def jvm64.def --kill-at --dllname jvm.dll --output-lib libjvm.dll.a
gcc -m64 -O2 -c -o findjava.o findjava.c
gcc -m64 -s -o findjava.exe findjava.o
make: Leaving directory `/cygdrive/c/tmp/RtmpOkRbne/R.INSTALL6c851921c1c/JavaGD/src/jvm-w32'
Find Java...
JAVA_HOME=C:/JDK1~1.6-X
Configuration done.
** libs
Warning: this package has a non-empty 'configure.win' file,
so building only the main architecture

gcc -m64 -I"C:/PROGRA~1/r/r-3.0/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -D_R_ -DWin32 -I/src/include -IC:/JDK1~1.6-X/include -IC:/JDK1~1.6-X/include/win32 -Iinclude/Win32 -O2 -Wall -std=gnu99 -mtune=core2 -c jGDtalk.c -o jGDtalk.o
jGDtalk.c:250:13: warning: 'newJavaGD_Hold' defined but not used [-Wunused-function]
gcc -m64 -I"C:/PROGRA~1/r/r-3.0/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -D_R_ -DWin32 -I/src/include -IC:/JDK1~1.6-X/include -IC:/JDK1~1.6-X/include/win32 -Iinclude/Win32 -O2 -Wall -std=gnu99 -mtune=core2 -c javaGD.c -o javaGD.o
gcc -m64 -I"C:/PROGRA~1/r/r-3.0/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -D_R_ -DWin32 -I/src/include -IC:/JDK1~1.6-X/include -IC:/JDK1~1.6-X/include/win32 -Iinclude/Win32 -O2 -Wall -std=gnu99 -mtune=core2 -c s2u.c -o s2u.o
gcc -m64 -shared -s -static-libgcc -o JavaGD.dll tmp.def jGDtalk.o javaGD.o s2u.o -ljvm.dll -L/src -Ljvm-w32 -L. -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LC:/PROGRA~1/r/r-3.0/bin/x64 -lR
installing to z:/rforge/Rlib/win7-3.0/JavaGD/libs/x64
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (JavaGD)