cfa2
About cfa2
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Version: 0.1.2
Result: OK Check time: 2018-01-24 20:05 * using log directory '' * using R Under development (unstable) (2018-01-24 r74156) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: ISO8859-1 * using option '--as-cran' * checking for file 'cfa2/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'cfa2' version '0.1.2' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialized R objects in the sources ... OK * checking whether package 'cfa2' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Title field: should not end in a period. * checking top-level files ... NOTE Non-standard file/directory found at top level: 'files' * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... NOTE Package in Depends field not imported from: 'cfa' These packages need to be imported from (in the NAMESPACE file) for when this namespace is loaded but not attached. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE cfa2: no visible global function definition for 'aggregate' cfa2: no visible global function definition for 'pnorm' cfa2: no visible global function definition for 'pchisq' cfa2: no visible global function definition for 'qnorm' cfa2: no visible global function definition for 'mcfa' scfa2: no visible global function definition for 'aggregate' scfa2: no visible global function definition for 'glm.fit' scfa2: no visible global function definition for 'poisson' Undefined global functions or variables: aggregate glm.fit mcfa pchisq pnorm poisson qnorm Consider adding importFrom("stats", "aggregate", "glm.fit", "pchisq", "pnorm", "poisson", "qnorm") to your NAMESPACE file. * checking Rd files ... NOTE prepare_Rd: cfa2-package.Rd:20-22: Dropping empty section \references prepare_Rd: cfa2.Rd:88-89: Dropping empty section \note * checking Rd metadata ... OK * checking Rd line widths ... NOTE Rd file 'cfa2.Rd': \examples lines wider than 100 characters: X <- matrix(c(1,1,1,1,1,1,1,1, 1,1,1,1,-1,-1,-1,-1, 1,1,-1,-1,1,1,-1,-1,1,-1,1,-1,1,-1,1, -1), ncol=4) X <- matrix(c(1,1,1,1,1,1,1,1,1,1,1,1,-1,-1,-1,-1,1,1,-1,-1,1,1,-1,-1,1,-1,1,-1,1,-1,1,-1,1,1,-1,-1,-1,-1,-1,-1,1,-1,1,-1,-1,1, ... [TRUNCATED] X <- matrix(c(1,1,1,1,1,1,1,1,1,1,1,1,-1,-1,-1,-1,1,1,-1,-1,1,1,-1,-1,1,-1,1,-1,1,-1,1,-1,1,1,-1,-1,-1,-1,-1,-1,1,-1,1,-1,-1,1, ... [TRUNCATED] mode5 <- cfa2(X, conf_cols=2:4, ofreq, binom.test=TRUE, exact.binom.test = TRUE, exact.binom.limit = 21, sorton="label", sort.d ... [TRUNCATED] mode6 <- cfa2(X1, conf_cols=2:3, ofreq1, binom.test=TRUE, sorton="label", sort.descending=TRUE, alpha=0.05) X2 <- matrix(c(1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1, 1,1,1,1,1,1,1,1,-1,-1,-1,-1,-1,-1,-1,-1, 1,1,1,1,-1,-1,-1,-1,1,1,1,1,-1,-1,-1,- ... [TRUNCATED] mode66 <- cfa2(X2, conf_cols=2:5, ofreq2, binom.test=TRUE, sorton="label", sort.descending=TRUE, bonferroni=FALSE, alpha=0.05) These lines will be truncated in the PDF manual. * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... OK * checking PDF version of manual ... OK * DONE Status: 6 NOTEs See '/00check.log' for details. Installation log: 00install.out
Build log for Windows 7 (R 3.0.x) (cfa2 0.1.2) * installing to library 'z:/rforge/Rlib/win7-3.0' ERROR: dependency 'cfa' is not available for package 'cfa2' * removing 'z:/rforge/Rlib/win7-3.0/cfa2' |