pcurve - Principal curve analysis - check results
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pcurve

About pcurve
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Package R docs

Version: 0.6-5
Result: OK
Check time: 2021-09-08 05:57
* using log directory ''
* using R Under development (unstable) (2021-09-06 r80865)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: ASCII
* using option '--as-cran'
* checking for file 'pcurve/DESCRIPTION' ... OK
* this is package 'pcurve' version '0.6-5'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package 'pcurve' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... NOTE
'library' or 'require' calls to packages already attached by Depends:
'mgcv' 'vegan'
Please remove these calls from your code.
* checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
print.gd
See section 'Registering S3 methods' in the 'Writing R Extensions'
manual.
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
finder : pc.fin: no visible global function definition for 'par'
finder : pc.fin: no visible global function definition for 'mtext'
finder : pc.fin: no visible global function definition for 'lines'
finder : pc.fin: no visible global function definition for 'abline'
finder : pc.fin: no visible global function definition for 'locator'
finder: no visible global function definition for 'points'
finder: no visible global function definition for 'abline'
finder: no visible global function definition for 'identify'
finder: no visible global function definition for 'locator'
pcchisq.plt: no visible global function definition for 'text'
pcchisq.plt: no visible global function definition for 'mtext'
pcdiags.plt: no visible global function definition for 'menu'
pcdiags.plt: no visible global function definition for 'locator'
pcdists.plt: no visible global function definition for 'par'
pcdists.plt: no visible global function definition for 'abline'
pcenv.plt: no visible global function definition for 'par'
pcenv.plt: no visible global function definition for 'text'
pcenv.plt: no visible global function definition for 'lines'
pcenv.plt: no visible global function definition for 'locator'
pcfinder.plt: no visible global function definition for 'points'
pcfinder.plt: no visible global function definition for 'mtext'
pcfinder.plt: no visible global function definition for 'abline'
pcflip.plt: no visible global function definition for 'text'
pcflip.plt: no visible global function definition for 'mtext'
pcflip.plt: no visible global function definition for 'segments'
pcflip.plt: no visible global function definition for 'lines'
pcflip.plt: no visible global function definition for 'locator'
pchist.plt: no visible global function definition for 'par'
pchist.plt: no visible global function definition for 'hist'
pcqqnorm.plt: no visible global function definition for 'par'
pcqqnorm.plt: no visible global function definition for 'text'
pcqqnorm.plt: no visible global function definition for 'locator'
pcres1.plt: no visible global function definition for 'par'
pcres1.plt: no visible global function definition for 'abline'
pcres1.plt: no visible global function definition for 'locator'
pcres2.plt: no visible global function definition for 'par'
pcres2.plt: no visible global function definition for 'abline'
pcres2.plt: no visible global function definition for 'lines'
pcres2.plt: no visible global function definition for 'locator'
pcresid.plt: no visible global function definition for 'par'
pcresid.plt: no visible global function definition for 'text'
pcresid.plt: no visible global function definition for 'mtext'
pcresid.plt: no visible global function definition for 'lines'
pcresid.plt: no visible global function definition for 'abline'
pcresid.plt: no visible global function definition for 'locator'
pcresp.plt: no visible global function definition for 'par'
pcresp.plt: no visible global function definition for 'text'
pcresp.plt: no visible global function definition for 'lines'
pcresp.plt: no visible global function definition for 'locator'
pcurve: no visible global function definition for 'par'
pcurve: no visible global function definition for 'lines'
pcurve: no visible global function definition for 'mtext'
pcurve: no visible global function definition for 'locator'
pcurve: no visible global function definition for 'segments'
pcurve: no visible global function definition for 'abline'
Undefined global functions or variables:
abline hist identify lines locator menu mtext par points segments
text
Consider adding
importFrom("graphics", "abline", "hist", "identify", "lines",
"locator", "mtext", "par", "points", "segments", "text")
importFrom("utils", "menu")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... NOTE
File 'pcurve/libs/pcurve.so':
Found no calls to: 'R_registerRoutines', 'R_useDynamicSymbols'

It is good practice to register native routines and to disable symbol
search.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking examples ... OK
* checking PDF version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 4 NOTEs
See
'/00check.log'
for details.



Installation log: 00install.out

Distribution log

SVN checkout/GIT clone log